K. K. Abu-amero, A. M. Gonzalez, J. M. Larruga, T. M. Bosley, and V. M. Cabrera, Eurasian and African mitochondrial DNA influences in the Saudi Arabian population, BMC Evolutionary Biology, vol.7, issue.1, p.32, 2007.
DOI : 10.1186/1471-2148-7-32

K. K. Abu-amero, A. Hellani, A. Gonzalez, J. Larruga, V. Cabrera et al., Saudi Arabian Y-Chromosome diversity and its relationship with nearby regions, BMC Genetics, vol.10, issue.1, p.59, 2009.
DOI : 10.1186/1471-2156-10-59

A. S. Bosch, E. Balaresque, P. Ballereau, S. Lee, A. Arroyo et al., The genetic legacy of religious diversity and intolerance: paternal lineages of Christians, Jews, and Muslims in the Iberian Peninsula, Am J Hum Genet, vol.83, pp.725-736, 2008.

Y. D. Alakoc, O. Gokcumen, A. Tug, T. Gultekin, E. Gulec et al., Y-chromosome and autosomal STR diversity in four proximate settlements in Central Anatolia, Forensic Science International: Genetics, vol.4, issue.5, pp.135-142, 2010.
DOI : 10.1016/j.fsigen.2010.01.016

F. Alshamali, L. Pereira, B. Budowle, E. S. Poloni, and M. Currat, Local Population Structure in Arabian Peninsula Revealed by Y-STR diversity, Human Heredity, vol.68, issue.1, pp.45-54, 2009.
DOI : 10.1159/000210448

N. Al-zahery, O. Semino, G. Benuzzi, C. Magri, G. Passarino et al., Y-chromosome and mtDNA polymorphisms in Iraq, a crossroad of the early human dispersal and of post-Neolithic migrations, Molecular Phylogenetics and Evolution, vol.28, issue.3, pp.458-72, 2003.
DOI : 10.1016/S1055-7903(03)00039-3

S. Anderson, A. T. Bankier, B. G. Barrell, M. H. De-bruijn, C. A. Drouin et al., Sequence and organization of the human mitochondrial genome, Nature, vol.87, issue.5806, pp.457-465, 1981.
DOI : 10.1038/290457a0

R. M. Andrews, I. Kubacka, P. F. Chinnery, R. N. Lightowlers, D. M. Turnbull et al., Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA, Nat Genet, vol.23, p.147, 1999.

B. Arredi, P. E. Paracchini, S. Zerjal, T. , F. D. Makrelouf et al., A Predominantly Neolithic Origin for Y-Chromosomal DNA Variation in North Africa, The American Journal of Human Genetics, vol.75, issue.2, pp.338-345, 2004.
DOI : 10.1086/423147

E. Arroyo-pardo, L. Gusmao, A. M. Lopez-parra, C. Baeza, M. S. Mesa et al., Genetic variability of 16 Y-chromosome STRs in a sample from Equatorial Guinea (Central Africa), Forensic Science International, vol.149, issue.1, pp.109-113, 2005.
DOI : 10.1016/j.forsciint.2004.06.006

I. Ayadi, L. Ammar-keskes, and A. Rebai, Haplotypes for 13 Y-chromosomal STR loci in South Tunisian population (Sfax region), Forensic Science International, vol.164, issue.2-3, pp.249-53, 2006.
DOI : 10.1016/j.forsciint.2005.10.006

M. M. Baig, A. A. Khan, and K. M. Kulkarni, Mitochondrial DNA Diversity in Tribal and Caste Groups of Maharashtra (India) and its Implication on Their Genetic Origins, Annals of Human Genetics, vol.88, issue.5, pp.453-60, 2004.
DOI : 10.1046/j.1529-8817.2004.00108.x

K. Balamurugan, G. Suhasini, M. Vijaya, S. Kanthimathi, N. Mullins et al., Y chromosome STR allelic and haplotype diversity in five ethnic Tamil populations from Tamil Nadu, India, Legal Medicine, vol.12, issue.5, pp.265-274, 2010.
DOI : 10.1016/j.legalmed.2010.05.008

M. J. Bamshad, W. S. Watkins, M. E. Dixon, L. B. Jorde, B. B. Rao et al., Female gene flow stratifies Hindu castes, Nature, vol.395, issue.6703, pp.651-653, 1998.
DOI : 10.1038/27103

H. J. Bandelt, P. Lahermo, M. Richards, and V. Macaulay, Detecting errors in mtDNA data by phylogenetic analysis, International Journal of Legal Medicine, vol.115, issue.2, pp.64-73, 2001.
DOI : 10.1007/s004140100228

A. Basu, N. Mukherjee, S. Roy, S. Sengupta, S. Banerjee et al., Ethnic India: A Genomic View, With Special Reference to Peopling and Structure, Genome Research, vol.13, issue.10, pp.2277-90, 2003.
DOI : 10.1101/gr.1413403

D. M. Behar, R. Villems, H. Soodyall, J. Blue-smith, L. Pereira et al., The Dawn of Human Matrilineal Diversity, The American Journal of Human Genetics, vol.82, issue.5, pp.1130-1170, 2008.
DOI : 10.1016/j.ajhg.2008.04.002

S. Beleza, L. Gusmao, A. Amorim, A. Carracedo, and A. Salas, The genetic legacy of western Bantu migrations, Human Genetics, vol.61, issue.4, pp.366-375, 2005.
DOI : 10.1007/s00439-005-1290-3

G. Berniell-lee, F. Calafell, E. Bosch, E. Heyer, L. Sica et al., Genetic and Demographic Implications of the Bantu Expansion: Insights from Human Paternal Lineages, Molecular Biology and Evolution, vol.26, issue.7, pp.1581-1590, 2009.
DOI : 10.1093/molbev/msp069
URL : https://hal.archives-ouvertes.fr/hal-00434929

G. Bertorelle and L. Excoffier, Inferring admixture proportions from molecular data, Molecular Biology and Evolution, vol.15, issue.10, pp.1298-1311, 1998.
DOI : 10.1093/oxfordjournals.molbev.a025858
URL : http://mbe.oxfordjournals.org/cgi/content/short/15/10/1298

M. Blanc and G. Bréguet, Immunoglobulin allotypes in Indonesians, International Meeting on Genetic Diversity and its Maintenance in Tropical Populations, 1985.

M. Blanc and J. Ducos, Les allotypes des systemes Gm et Km dans les provinces francaises, pp.207-226, 1986.

M. Blanc, A. Sanchez-mazas, N. H. Van-blyenburgh, A. Sevin, G. Pison et al., Interethnic genetic differentiation: Gm polymorphism in eastern Senegal, Am J Hum Genet, vol.46, pp.383-392, 1990.

A. Blanco-verea, J. C. Jaime, M. Brion, and A. Carracedo, Y-chromosome lineages in native South American population, Forensic Science International: Genetics, vol.4, issue.3, pp.187-93, 2009.
DOI : 10.1016/j.fsigen.2009.08.008

M. R. Blench, New palaeo-zoogeographical evidence for the settlement of Madagascar, Azania XLII: Journal of the British Institute in Eastern Africa, vol.42, pp.69-82, 2007.

N. Borot, J. M. Dugoujon, B. Janicijevic, P. Rudan, and A. Chaventre, Gm and Km immunoglobulin allotypes in populations on the island of Pag (Croatia), Coll. Anthropol, vol.15, pp.247-255, 1991.

E. Bosch, F. Calafell, A. Perez-lezaun, D. Comas, H. Izaabel et al., Y chromosome STR haplotypes in four populations from northwest Africa, International Journal of Legal Medicine, vol.114, issue.1-2, pp.36-40, 2000.
DOI : 10.1007/s004140000136

Z. Brakez, E. Bosch, H. Izaabel, O. Akhayat, D. Comas et al., Human mitochondrial DNA sequence variation in the Moroccan population of the Souss area, Annals of Human Biology, vol.61, issue.3, pp.295-307, 2001.
DOI : 10.1080/030144601300119106

A. Brehm, L. Pereira, H. J. Bandelt, M. J. Prata, and A. Amorim, Mitochondrial portrait of the Cabo Verde archipelago: the Senegambian outpost of Atlantic slave trade, Annals of Human Genetics, vol.66, issue.1, pp.49-60, 2002.
DOI : 10.1017/S0003480001001002

M. Brion, B. Sobrino, A. Blanco-verea, M. V. Lareu, and A. Carracedo, Hierarchical analysis of 30 Y-chromosome SNPs in European populations, International Journal of Legal Medicine, vol.312, issue.1, pp.10-15, 2005.
DOI : 10.1007/s00414-004-0439-2

N. Brucato, Genetic diversity and dynamics of the Noir Marron settlement in French Guiana, Thèse de doctorat en Anthropologie génétique, p.162, 2010.

N. Brucato, O. Cassar, L. Tonasso, P. Tortevoye, F. Migot-nabias et al., The imprint of the Slave Trade in an African American population: mitochondrial DNA, Y chromosome and HTLV-1 analysis in the Noir Marron of French Guiana, BMC Evolutionary Biology, vol.10, issue.1, p.314, 2010.
DOI : 10.1186/1471-2148-10-314
URL : https://hal.archives-ouvertes.fr/pasteur-00530132

A. M. Cadenas, L. A. Zhivotovsky, L. L. Cavalli-sforza, P. A. Underhill, and R. J. Herrera, Y-chromosome diversity characterizes the Gulf of Oman, European Journal of Human Genetics, vol.27, issue.3, pp.374-386, 2008.
DOI : 10.1017/S0021932003005911

F. Calafell, P. Underhill, A. Tolun, D. Angelicheva, and L. Kalaydjieva, From Asia to Europe: mitochondrial DNA sequence variability in Bulgarians and Turks, Annals of Human Genetics, vol.63, issue.1, pp.35-49, 1996.
DOI : 10.1073/pnas.88.19.8720

R. Calderon, B. Ambrosio, E. Guitard, A. Gonzalez-martin, U. Aresti et al., Genetic Position of Andalusians from Huelva in Relation to Other European and North African Populations: A Study Based on GM and KM Allotypes, Human Biology, vol.78, issue.6, pp.663-679, 2006.
DOI : 10.1353/hub.2007.0008
URL : https://hal.archives-ouvertes.fr/hal-00164915

R. Calderon, R. Lodeiro, T. Varela, J. Farina, A. B. Guitard et al., GM and KM immunoglobulin allotypes in the Galician population: new insights into the peopling of the Iberian Peninsula, BMC Genetics, vol.8, issue.1, p.37, 2007.
DOI : 10.1186/1471-2156-8-37
URL : https://hal.archives-ouvertes.fr/hal-00164878

R. Calderon, C. Vidales, J. A. Pena, A. Perez-miranda, and J. M. Dugoujon, Immunoglobulin allotypes (Gm and KM). in Basques from Spain: approach to the origin of the Basque population, Hum Biol, vol.70, pp.667-698, 1998.
URL : https://hal.archives-ouvertes.fr/hal-00164878

L. Castri, S. Tofanelli, P. Garagnani, C. Bini, X. Fosella et al., mtDNA variability in two Bantu-speaking populations (Shona and Hutu) from Eastern Africa: Implications for peopling and migration patterns in sub-Saharan Africa, American Journal of Physical Anthropology, vol.13, issue.2, pp.302-313, 2009.
DOI : 10.1002/ajpa.21070

L. L. Cavalli-sforza and W. F. Bodmer, The Genetics of Human Populations, Scientific American, vol.231, issue.3, 1971.
DOI : 10.1038/scientificamerican0974-80

L. L. Cavalli-sforza, L. A. Zonta, F. Nuzzo, L. Bernini, W. W. De-jong et al., Studies on African Pygmies. I. A pilot investigation of Babinga Pygmies in the Central African Republic (with an analysis of genetic distances), Am J Hum Genet, vol.21, pp.252-274, 1969.

V. Cerny, L. Pereira, M. Kujanova, A. Vasikova, M. Hajek et al., Out of Arabia-The settlement of Island Soqotra as revealed by mitochondrial and Y chromosome genetic diversity, American Journal of Physical Anthropology, vol.22, issue.4, pp.439-447, 2009.
DOI : 10.1002/ajpa.20960

N. Cerutti, J. M. Dugoujon, E. Guitard, R. Massa, and E. , Gm and Km immunoglobulin allotypes in Sicily, Immunogenetics, vol.55, issue.10, pp.674-681, 2004.
DOI : 10.1007/s00251-003-0628-z

H. Chaabani, A. N. Helal, E. Van-loghem, A. Langaney, A. Benammar-elgaaied et al., GENETIC STUDY OF TUNISIAN BERBERS. I. Gm, Am AND Km IMMUNOGLOBULIN ALLOTYPES AND ABO BLOOD GROUPS, European Journal of Immunogenetics, vol.8, issue.2, pp.107-113, 1984.
DOI : 10.1038/189586a0

H. Chaabani, A. Sanchez-mazas, and S. F. Sallami, Genetic differentiation of Yemeni people according to rhesus and Gm polymorphisms, Annales de G??n??tique, vol.43, issue.3-4, pp.155-162, 2000.
DOI : 10.1016/S0003-3995(00)01023-6

Y. M. Chang, R. Perumal, P. Y. Keat, and D. L. Kuehn, Haplotype diversity of 16 Y-chromosomal STRs in three main ethnic populations (Malays, Chinese and Indians) in Malaysia, Forensic Science International, vol.167, issue.1, pp.70-76, 2007.
DOI : 10.1016/j.forsciint.2006.01.002

Y. S. Chen, A. Olckers, T. G. Schurr, A. M. Kogelnik, K. Huoponen et al., mtDNA Variation in the South African Kung and Khwe???and Their Genetic Relationships to Other African Populations, The American Journal of Human Genetics, vol.66, issue.4, pp.1362-83, 2000.
DOI : 10.1086/302848

J. Chiaroni, M. Touinssi, C. Frassati, A. Degioanni, M. Gibert et al., Genetic Characterization of the Population of Grande Comore Island (Njazidja) According to Major Blood Groups, Human Biology, vol.76, issue.4, pp.527-541, 2004.
DOI : 10.1353/hub.2004.0053

J. Chiaroni, P. A. Underhill, and L. L. Cavalli-sforza, Y chromosome diversity, human expansion, drift, and cultural evolution, Proceedings of the National Academy of Sciences, vol.106, issue.48, pp.20174-20179, 2009.
DOI : 10.1073/pnas.0910803106
URL : https://hal.archives-ouvertes.fr/hal-00439948

C. Cinnioglu, R. King, T. Kivisild, E. Kalfoglu, S. Atasoy et al., Excavating Y-chromosome haplotype strata in Anatolia, Human Genetics, vol.114, issue.2, pp.127-175, 2004.
DOI : 10.1007/s00439-003-1031-4

M. Coelho, F. Sequeira, D. Luiselli, S. Beleza, and J. Rocha, On the edge of Bantu expansions: mtDNA, Y chromosome and lactase persistence genetic variation in southwestern Angola, BMC Evolutionary Biology, vol.9, issue.1, 2009.
DOI : 10.1186/1471-2148-9-80

D. Comas, F. Calafell, N. Bendukidze, L. Fananas, and J. Bertranpetit, Georgian and Kurd mtDNA sequence analysis shows a lack of correlation between languages and female genetic lineages, American Journal of Physical Anthropology, vol.148, issue.1, pp.5-16, 2000.
DOI : 10.1002/(SICI)1096-8644(200005)112:1<5::AID-AJPA2>3.0.CO;2-Z

H. B. Corte-real, V. A. Macaulay, M. B. Richards, G. Hariti, M. S. Issad et al., Genetic diversity in the Iberian Peninsula determined from mitochondrial sequence analysis, Annals of Human Genetics, vol.10, issue.4, pp.331-50, 1996.
DOI : 10.1073/pnas.88.19.8720

C. Coudray, E. Guitard, F. Chennawi, . El, and J. M. Dugoujon, Study of Gm immunoglobulin allotypes in Egyptian Berbers (Siwa Oasis), Egypt at its Origins 2. (B. Midant-Reynes and Y. Tristant eds.)., Orientalia Lovaniensa Analecta, pp.265-273, 2008.

C. Coudray, E. Guitard, M. Kandil, N. Harich, M. Melhaoui et al., Study of GM immunoglobulin allotypic system in Berbers and Arabs from Morocco, American Journal of Human Biology, vol.58, issue.1, pp.23-34, 2006.
DOI : 10.1002/ajhb.20465

C. Coudray, A. Olivieri, A. Achilli, M. Pala, M. Melhaoui et al., The Complex and Diversified Mitochondrial Gene Pool of Berber Populations, Annals of Human Genetics, vol.36, issue.2, pp.196-214, 2009.
DOI : 10.1111/j.1469-1809.2008.00493.x

F. Cruciani, P. Santolamazza, P. Shen, V. Macaulay, P. Moral et al., A Back Migration from Asia to Sub-Saharan Africa Is Supported by High-Resolution Analysis of Human Y-Chromosome Haplotypes, The American Journal of Human Genetics, vol.70, issue.5, pp.1197-1214, 2002.
DOI : 10.1086/340257

P. Dard, M. P. Lefranc, L. Osipova, and A. Sanchez-mazas, DNA sequence variability of IGHG3 alleles associated to the main G3m haplotypes in human populations, European Journal of Human Genetics, vol.9, issue.10, pp.765-772, 2001.
DOI : 10.1038/sj.ejhg.5200700

C. De-filippo, C. Barbieri, M. Whitten, S. W. Mpoloka, E. D. Gunnarsdottir et al., Y-Chromosomal Variation in Sub-Saharan Africa: Insights Into the History of Niger-Congo Groups, Molecular Biology and Evolution, vol.28, issue.3, pp.1255-1269, 2011.
DOI : 10.1093/molbev/msq312

F. Delfin, J. M. Salvador, G. C. Calacal, H. B. Perdigon, K. A. Tabbada et al., The Y-chromosome landscape of the Philippines: extensive heterogeneity and varying genetic affinities of Negrito and non-Negrito groups, European Journal of Human Genetics, vol.4, issue.2, pp.224-254, 2010.
DOI : 10.1038/ejhg.2010.162

M. V. Derenko, B. A. Malyarchuk, I. K. Dambueva, G. O. Shaikhaev, C. M. Dorzhu et al., Mitochondrial DNA variation in two South Siberian Aboriginal populations: implications for the genetic history of North Asia, Hum Biol, vol.72, pp.945-73, 2000.

Y. Dobashi, A. Kido, N. Fujitani, R. Susukida, M. Hara et al., Y-chromosome STR haplotypes in a Bangladeshi population, Legal Medicine, vol.7, issue.2, pp.122-128, 2005.
DOI : 10.1016/j.legalmed.2004.08.005

D. Gommery, B. Ramanivosoa, M. Faure, C. Guérin, P. Kerloc-'h et al., Les plus anciennes traces d???activit??s anthropiques de Madagascar sur des ossements d???hippopotames subfossiles d???Anjohibe (Province de Mahajanga), Comptes Rendus Palevol, vol.10, issue.4, pp.271-278, 2011.
DOI : 10.1016/j.crpv.2011.01.006

V. Dubut, F. Cartault, C. Payet, M. D. Thionville, and P. Murail, Complete Mitochondrial Sequences for Haplogroups M23 and M46: Insights into the Asian Ancestry of the Malagasy Population, Human Biology, vol.81, issue.4, pp.495-500, 2009.
DOI : 10.3378/027.081.0407
URL : https://hal.archives-ouvertes.fr/halshs-00449196

V. Dubut, L. Chollet, P. Murail, F. Cartault, E. Beraud-colomb et al., mtDNA polymorphisms in five French groups: importance of regional sampling, European Journal of Human Genetics, vol.12, issue.4, pp.293-300, 2004.
DOI : 10.1038/sj.ejhg.5201145
URL : https://hal.archives-ouvertes.fr/halshs-00433402

J. M. Dugoujon, G. Lange, A. Blancher, S. Alie-daran, and Y. Marty, Characterization of an IgG2, G2m(23) Anti-Rh-D Antibody, Vox Sanguinis, vol.62, issue.2, pp.133-136, 1989.
DOI : 10.1111/j.1423-0410.1989.tb01150.x

J. M. Dugoujon, O. Lemaire, E. Guitard, A. Sevin, G. Larrouy et al., Diversité des allotypes des immunoglobulines (systèmes Gm et Km). d'une population berbère de la vallée du Tacchedirt (Haut Atlas, Maroc) Comparaison a d'autres populations africaines et européennes et histoire du peuplement de l'Afrique du Nord, pp.57-72, 2005.

I. Dupanloup and G. Bertorelle, Inferring Admixture Proportions from Molecular Data: Extension to Any Number of Parental Populations, Molecular Biology and Evolution, vol.18, issue.4, pp.672-675, 2001.
DOI : 10.1093/oxfordjournals.molbev.a003847

M. Eaaswarkhanth, I. Haque, Z. Ravesh, I. G. Romero, P. R. Meganathan et al., Traces of sub-Saharan and Middle Eastern lineages in Indian Muslim populations, European Journal of Human Genetics, vol.1, issue.3, pp.354-363, 2009.
DOI : 10.1016/j.ajhg.2008.01.020

M. El-sibai, D. E. Platt, M. Haber, Y. Xue, S. C. Youhanna et al., Geographical Structure of the Y-chromosomal Genetic Landscape of the Levant: A coastal-inland contrast, Annals of Human Genetics, vol.82, issue.6, pp.568-81, 2009.
DOI : 10.1111/j.1469-1809.2009.00538.x

B. Ely, J. L. Wilson, F. Jackson, and B. A. Jackson, Correction: African American mitochondrial DNAs often match mtDNAs found in multiple African ethnic groups, BMC Biology, vol.5, issue.1, p.34, 2006.
DOI : 10.1186/1741-7007-5-13

E. Esteban, J. M. Dugoujon, E. Guitard, M. T. Senegas, C. Manzano et al., Genetic diversity in Northern Spain (Basque Country and Cantabria): GM and KM variation related to demographic histories, European Journal of Human Genetics, vol.6, issue.4, pp.315-324, 1998.
DOI : 10.1038/sj.ejhg.5200186

L. Excoffier, G. Laval, and S. Schneider, Arlequin (version 3.0) An integrated software package for population genetics data analysis, Evol Bioinform Online, vol.1, pp.47-50, 2005.

K. Fadhlaoui-zid, J. M. Dugoujon, A. Elgaaied, M. B. Amor, B. Yacoubi et al., Genetic Diversity in Tunisia: A Study Based on the GM Polymorphism of Human Immunoglobulins, Human Biology, vol.76, issue.4, pp.559-567, 2004.
DOI : 10.1353/hub.2004.0054

A. Falchi, L. Giovannoni, C. M. Calo, I. S. Piras, P. Moral et al., Genetic history of some western Mediterranean human isolates through mtDNA HVR1 polymorphisms, Journal of Human Genetics, vol.5, issue.1, pp.9-14, 2006.
DOI : 10.1007/s10038-005-0324-y

J. G. Flanagan and T. H. Rabbitts, Arrangement of human immunoglobulin heavy chain constant region genes implies evolutionary duplication of a segment containing ??, ?? and ?? genes, Nature, vol.82, issue.5894, pp.709-713, 1982.
DOI : 10.1038/300709a0

C. Flores, N. Maca-meyer, J. M. Larruga, V. M. Cabrera, N. Karadsheh et al., Isolates in a corridor of migrations: a high-resolution analysis of Y-chromosome variation in Jordan, Journal of Human Genetics, vol.71, issue.7, pp.435-441, 2005.
DOI : 10.1007/s10038-005-0274-4

S. Fornarino, M. Pala, V. Battaglia, R. Maranta, A. Achilli et al., Mitochondrial and Y-chromosome diversity of the Tharus (Nepal): a reservoir of genetic variation, BMC Evolutionary Biology, vol.9, issue.1, 2009.
DOI : 10.1186/1471-2148-9-154

P. Forster, F. Cali, A. Rohl, E. Metspalu, R. D-'anna et al., Continental and subcontinental distributions of mtDNA control region types, International Journal of Legal Medicine, vol.113, issue.2, pp.99-108, 2002.
DOI : 10.1007/s00414-001-0261-z

Y. X. Fu, Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection, Genetics, vol.147, pp.915-940, 1997.

J. Fujihara, I. Yuasa, T. Muro, R. Iida, E. Tsubota et al., Allele frequencies and haplotypes for 28 Y-STRs in Ovambo population, Legal Medicine, vol.11, issue.4, pp.205-213, 2009.
DOI : 10.1016/j.legalmed.2009.03.009

R. J. Gan, S. L. Pan, L. F. Mustavich, Z. D. Qin, X. Y. Cai et al., Pinghua population as an exception of Han Chinese???s coherent genetic structure, Journal of Human Genetics, vol.3, issue.4, pp.303-316, 2008.
DOI : 10.1007/s10038-008-0250-x

M. P. Giraldo, M. Vallet, E. Guitard, M. T. Senegas, A. Sevin et al., GM and KM immunoglobulin allotypes in a Spanish Pyrenean population: Val d'Aran, Annals of Human Biology, vol.15, issue.5, pp.453-465, 1998.
DOI : 10.1080/03014469800006692

V. Gomes, C. Alves, A. Amorim, A. Carracedo, P. Sanchez-diz et al., Nilotes from Karamoja, Uganda: Haplotype data defined by 17 Y-chromosome STRs, Forensic Science International: Genetics, vol.4, issue.4, pp.83-86, 2009.
DOI : 10.1016/j.fsigen.2009.07.001

R. Goncalves, A. Rosa, A. Freitas, A. Fernandes, T. Kivisild et al., Y-chromosome lineages in Cabo Verde Islands witness the diverse geographic origin of its first male settlers, Human Genetics, vol.113, issue.6, pp.467-472, 2003.
DOI : 10.1007/s00439-003-1007-4

R. Goncalves, A. Freitas, M. Branco, A. Rosa, A. T. Fernandes et al., Y-chromosome Lineages from Portugal, Madeira and A??ores Record Elements of Sephardim and Berber Ancestry, Annals of Human Genetics, vol.74, issue.2, pp.443-454, 2005.
DOI : 10.1111/j.1529-8817.2005.00161.x

L. Graven, G. Passarino, O. Semino, P. Boursot, S. Santachiara-benerecetti et al., Evolutionary correlation between control region sequence and restriction polymorphisms in the mitochondrial genome of a large Senegalese Mandenka sample, Mol Biol Evol, vol.12, pp.334-379, 1995.

M. Haber, D. E. Platt, D. A. Badro, Y. Xue, M. El-sibai et al., Influences of history, geography, and religion on genetic structure: the Maronites in Lebanon, European Journal of Human Genetics, vol.141, issue.3, pp.334-374, 2011.
DOI : 10.1177/1525822X0001200104

E. Hagelberg, N. Goldman, P. Lio, S. Whelan, W. Schiefenhovel et al., Evidence for mitochondrial DNA recombination in a human population of island Melanesia, Proceedings of the Royal Society B: Biological Sciences, vol.266, issue.1418, pp.485-92, 1999.
DOI : 10.1098/rspb.1999.0663

C. Hallenberg, B. Simonsen, J. Sanchez, and N. Morling, Y-chromosome STR haplotypes in Somalis, Forensic Science International, vol.151, issue.2-3, pp.317-338, 2005.
DOI : 10.1016/j.forsciint.2005.01.011

M. F. Hammer, A. B. Spurdle, T. Karafet, M. R. Bonner, E. T. Wood et al., The geographic distribution of human Y chromosome variation, Genetics, vol.145, pp.787-805, 1997.

N. Harich, M. D. Costa, V. Fernandes, M. Kandil, J. B. Pereira et al., The trans-Saharan slave trade - clues from interpolation analyses and high-resolution characterization of mitochondrial DNA lineages, BMC Evolutionary Biology, vol.10, issue.1, p.138, 2010.
DOI : 10.1186/1471-2148-10-138

S. Hazout, J. M. Dugoujon, F. Loirat, and J. Constans, Genetic similarity maps and immunoglobulin allotypes of eleven populations from the Pyrenees (France), Annals of Human Genetics, vol.30, issue.2, pp.161-174, 1991.
DOI : 10.1080/03014468100004791

A. N. Helal, L. Rivat-peran, E. Van-loghem, G. De-lange, A. Langaney et al., Further contribution of common Gm*-Am* haplotypes and Km* alleles in the characterization of the Tunisian population, Exp Clin Immunogenet, vol.5, pp.1-14, 1988.

R. Hewitt, A. Krause, A. Goldman, G. Campbell, and T. Jenkins, Beta-globin haplotypes analysiss suggest that a major source of Malagasy ancestry is derived from Bantu-speaking Negroids, 1996.

C. Hill, P. Soares, M. Mormina, V. Macaulay, D. Clarke et al., A Mitochondrial Stratigraphy for Island Southeast Asia, The American Journal of Human Genetics, vol.80, issue.1, pp.29-43, 2007.
DOI : 10.1086/510412

K. E. Holsinger and B. S. Weir, Genetics in geographically structured populations: defining, estimating and interpreting FST, Nature Reviews Genetics, vol.97, issue.9, pp.639-650, 2009.
DOI : 10.1038/nrg2611

M. E. Hurles, B. C. Sykes, M. A. Jobling, and P. Forster, The Dual Origin of the Malagasy in Island Southeast Asia and East Africa: Evidence from Maternal and Paternal Lineages, The American Journal of Human Genetics, vol.76, issue.5, pp.894-901, 2005.
DOI : 10.1086/430051

R. J. Illeperuma, D. Markalanda, J. L. Mountain, W. D. Ratnasooriya, N. D. Fernandopulle et al., Haplotype data for 12 Y-chromosome STR loci of Sri Lankans, Forensic Science International: Genetics, vol.4, issue.4, pp.119-139, 2009.
DOI : 10.1016/j.fsigen.2009.10.003

A. D. Immel, M. Erhuma, T. Mustafa, M. Kleiber, and M. Klintshar, Y-chromosomal STR haplotypes in an Arab population from Libya, International Congress Series, vol.1288, pp.156-158, 2006.
DOI : 10.1016/j.ics.2005.09.011

J. Irwin, J. Saunier, K. Strouss, C. Paintner, T. Diegoli et al., Mitochondrial control region sequences from northern Greece and Greek Cypriots, International Journal of Legal Medicine, vol.116, issue.6, pp.87-96, 2008.
DOI : 10.1007/s00414-007-0173-7

T. Jenkins, A. Zoutendyk, and A. G. Steinberg, Gammaglobulin groups (Gm and Inv) of various Southern African populations, American Journal of Physical Anthropology, vol.14, issue.2, pp.197-218, 1970.
DOI : 10.1002/ajpa.1330320206

H. J. Jin, C. Tyler-smith, and W. Kim, The Peopling of Korea Revealed by Analyses of Mitochondrial DNA and Y-Chromosomal Markers, PLoS ONE, vol.70, issue.1, 2009.
DOI : 10.1371/journal.pone.0004210.s007

M. A. Jobling, M. E. Hurles, and C. Tyler-smith, Human Evolutionary Genetics: origins, peoples and disease, p.523, 2004.

T. M. Karafet, B. Hallmark, M. P. Cox, H. Sudoyo, S. Downey et al., Major East-West Division Underlies Y Chromosome Stratification across Indonesia, Molecular Biology and Evolution, vol.27, issue.8, pp.1833-1844, 2010.
DOI : 10.1093/molbev/msq063

T. M. Karafet, F. L. Mendez, M. B. Meilerman, P. A. Underhill, S. L. Zegura et al., New binary polymorphisms reshape and increase resolution of the human Y chromosomal haplogroup tree, Genome Research, vol.18, issue.5, pp.830-838, 2008.
DOI : 10.1101/gr.7172008

M. Kayser, S. Brauer, R. Cordaux, A. Casto, O. Lao et al., Melanesian and Asian Origins of Polynesians: mtDNA and Y Chromosome Gradients Across the Pacific, Molecular Biology and Evolution, vol.23, issue.11, pp.2234-2244, 2006.
DOI : 10.1093/molbev/msl093
URL : https://hal.archives-ouvertes.fr/hal-00117338

K. M. Kelly, Gm Polymorphisms, Linguistic Affinities, and Natural Selection in Melanesia, Current Anthropolog, pp.201-219, 1990.
DOI : 10.1086/203827

T. Kivisild, M. Reidla, E. Metspalu, A. Rosa, A. Brehm et al., Ethiopian Mitochondrial DNA Heritage: Tracking Gene Flow Across and Around the Gate of Tears, The American Journal of Human Genetics, vol.75, issue.5, pp.752-70, 2004.
DOI : 10.1086/425161

A. Knight, P. A. Underhill, H. M. Mortensen, L. A. Zhivotovsky, A. A. Lin et al., African Y Chromosome and mtDNA Divergence Provides Insight into the History of Click Languages, Current Biology, vol.13, issue.6, pp.464-473, 2003.
DOI : 10.1016/S0960-9822(03)00130-1

M. Krings, A. E. Salem, K. Bauer, H. Geisert, A. K. Malek et al., mtDNA Analysis of Nile River Valley Populations: A Genetic Corridor or a Barrier to Migration?, The American Journal of Human Genetics, vol.64, issue.4, pp.1166-76, 1999.
DOI : 10.1086/302314

K. D. Kwak, H. J. Jin, D. J. Shin, J. M. Kim, L. Roewer et al., Y-chromosomal STR haplotypes and their applications to forensic and population studies in east Asia, International Journal of Legal Medicine, vol.71, issue.4, pp.195-201, 2005.
DOI : 10.1007/s00414-004-0518-4

M. Lecerf, M. Filali, G. Gresenguet, A. Ndjoyi-mbiguino, L. Goff et al., Allele frequencies and haplotypes of eight Y-short tandem repeats in Bantu population living in Central Africa, Forensic Science International, vol.171, issue.2-3, pp.212-217, 2007.
DOI : 10.1016/j.forsciint.2006.04.017

P. Lefevre-witier, Structure et dynamique genetiques d'une communaute rurale du Sahara central (Ideles), 1982.

G. Lefranc, G. De-lange, L. Rivat, A. Langaney, M. P. Lefranc et al., Gm, Am and Km immunoglobulin allotypes of two populations in Tunisia, Human Genetics, vol.1, issue.2, pp.199-211, 1979.
DOI : 10.1007/BF00390242

G. Lefranc, J. Loiselet, L. Rivat, and C. Ropartz, Gm, Km and ISf Allotypes in the Lebanese Population, Acta Anthropogenetica, vol.1, pp.34-45, 1976.

G. Lefranc, L. Rivat, J. L. Serre, J. M. Lalouel, G. Pison et al., Common and uncommon immunoglobulin haplotypes among Lebanese communities, Human Genetics, vol.41, issue.2, pp.197-209, 1978.
DOI : 10.1007/BF00273102

M. P. Lefranc and G. Lefranc, Molecular genetics of immunoglobulin allotype expression In The human IgG subclasses: molecular analysis of structure, function and regulation, pp.43-78, 1990.

M. P. Lefranc, G. Lefranc, and T. H. Rabbitts, Inherited deletion of immunoglobulin heavy chain constant region genes in normal human individuals, Nature, vol.82, issue.5894, pp.760-762, 1982.
DOI : 10.1038/300760a0

H. Li, X. Cai, E. R. Winograd-cort, B. Wen, X. Cheng et al., Mitochondrial DNA diversity and population differentiation in southern East Asia, American Journal of Physical Anthropology, vol.21, issue.4, pp.481-489, 2007.
DOI : 10.1002/ajpa.20690

R. Lorini, G. Orecchia, M. Martinetti, J. M. Dugoujon, and M. Cuccia, AUTOIMMUNITY IN VITILIGO: RELATIONSHIP WITH HLA, Gm AND Km POLYMORPHISMS, Autoimmunity, vol.4, issue.3, pp.255-260, 1992.
DOI : 10.3109/08916939209035163

B. Y. Loveslati, A. Sanchez-mazas, H. Ennafaa, R. Marrakchi, J. M. Dugoujon et al., A study of Gm allotypes and immunoglobulin heavy gamma IGHG genes in Berbers, Arabs and sub-Saharan Africans from Jerba Island, Tunisia, European Journal of Immunogenetics, vol.24, issue.5, pp.531-538, 2001.
DOI : 10.1007/s004390051142

J. R. Luis, D. J. Rowold, M. Regueiro, B. Caeiro, C. Cinnioglu et al., The Levant versus the Horn of Africa: Evidence for Bidirectional Corridors of Human Migrations, The American Journal of Human Genetics, vol.74, issue.3, pp.532-544, 2004.
DOI : 10.1086/382286

N. Maca-meyer, M. Arnay, J. C. Rando, C. Flores, A. M. Gonzalez et al., Ancient mtDNA analysis and the origin of the Guanches, European Journal of Human Genetics, vol.12, issue.2, pp.155-62, 2004.
DOI : 10.1038/sj.ejhg.5201075

V. Macaulay, C. Hill, A. Achilli, C. Rengo, D. Clarke et al., Single, Rapid Coastal Settlement of Asia Revealed by Analysis of Complete Mitochondrial Genomes, Science, vol.308, issue.5724, pp.1034-1040, 2005.
DOI : 10.1126/science.1109792

V. Macaulay, M. Richards, E. Hickey, E. Vega, F. Cruciani et al., The Emerging Tree of West Eurasian mtDNAs: A Synthesis of Control-Region Sequences and RFLPs, The American Journal of Human Genetics, vol.64, issue.1, pp.232-281, 1999.
DOI : 10.1086/302204

S. Maruyama, C. Nohira-koike, K. Minaguchi, and P. Nambiar, MtDNA control region sequence polymorphisms and phylogenetic analysis of Malay population living in or around Kuala Lumpur in Malaysia, International Journal of Legal Medicine, vol.2, issue.2???3, pp.165-70, 2010.
DOI : 10.1007/s00414-009-0355-6

H. Matsumoto, T. Miyazaki, K. Omoto, S. Misawa, S. Harada et al., Population genetic studies of the Philippine Negritos. II. gm and km allotypes of three population groups, Am J Hum Genet, vol.31, pp.70-76, 1979.

S. Mirabal, T. Varljen, T. Gayden, M. Regueiro, S. Vujovic et al., Human Y-chromosome short tandem repeats: A tale of acculturation and migrations as mechanisms for the diffusion of agriculture in the Balkan Peninsula, American Journal of Physical Anthropology, vol.11, issue.3, pp.380-90, 2010.
DOI : 10.1002/ajpa.21235

T. Mohammad, Y. Xue, M. Evison, and C. Tyler-smith, Genetic structure of nomadic Bedouin from Kuwait, Heredity, vol.155, issue.5, pp.425-433, 2009.
DOI : 10.1086/380911

S. Mona, K. E. Grunz, S. Brauer, B. Pakendorf, L. Castri et al., Genetic Admixture History of Eastern Indonesia as Revealed by Y-Chromosome and Mitochondrial DNA Analysis, Molecular Biology and Evolution, vol.26, issue.8, pp.1865-77, 2009.
DOI : 10.1093/molbev/msp097

J. L. Mountain, J. M. Hebert, S. Bhattacharyya, P. A. Underhill, C. Ottolenghi et al., Demographic history of India and mtDNA-sequence diversity, Am J Hum Genet, vol.56, pp.979-92, 1995.

S. Msaidie, A. Ducourneau, G. Boetsch, G. Longepied, K. Papa et al., Genetic diversity on the Comoros Islands shows early seafaring as major determinant of human biocultural evolution in the Western Indian Ocean, European Journal of Human Genetics, vol.158, issue.1, pp.89-94, 2011.
DOI : 10.1086/302749
URL : https://hal.archives-ouvertes.fr/hal-00565113

M. Nagy, L. Henke, J. Henke, P. K. Chatthopadhyay, A. Volgyi et al., Searching for the origin of Romanies: Slovakian Romani, Jats of Haryana and Jat Sikhs Y-STR data in comparison with different Romani populations, Forensic Science International, vol.169, issue.1, pp.19-26, 2007.
DOI : 10.1016/j.forsciint.2006.07.020

I. Nasidze, D. Quinque, I. Dupanloup, R. Cordaux, L. Kokshunova et al., Genetic evidence for the Mongolian ancestry of Kalmyks, American Journal of Physical Anthropology, vol.72, issue.4, pp.846-54, 2005.
DOI : 10.1002/ajpa.20159

I. Nasidze, H. Schadlich, and M. Stoneking, Haplotypes from the Caucasus, Turkey and Iran for nine Y-STR loci, Forensic Science International, vol.137, issue.1, pp.85-93, 2003.
DOI : 10.1016/S0379-0738(03)00272-X

M. Nei, Molecular evolutionary genetics, 1987.

I. Nogueiro, L. Manco, V. Gomes, A. Amorim, and L. Gusmao, Phylogeographic analysis of paternal lineages in NE Portuguese Jewish communities, American Journal of Physical Anthropology, vol.83, issue.3, pp.373-381, 2010.
DOI : 10.1002/ajpa.21154

J. Ohashi, I. Naka, K. Tokunaga, T. Inaoka, Y. Ataka et al., Brief communication: Mitochondrial DNA variation suggests extensive gene flow from Polynesian ancestors to indigenous Melanesians in the northwestern Bismarck Archipelago, American Journal of Physical Anthropology, vol.113, issue.4, pp.551-557, 2006.
DOI : 10.1002/ajpa.20383

K. Omoto, S. Misawa, S. Harada, J. S. Sumpaico, P. M. Medado et al., Population genetic studies of the Philippine Negritos. I. A pilot survey of red cell enzyme and serum protein groups, Am J Hum Genet, vol.30, pp.190-201, 1978.

J. Oudin, L'allotypie de certains antigenes proteiques du serum, C R Hebd Seances Acad Sci, vol.242, pp.2606-2608, 1956.

L. Pereira, V. Macaulay, A. Torroni, R. Scozzari, M. J. Prata et al., Prehistoric and historic traces in the mtDNA of Mozambique: insights into the Bantu expansions and the slave trade, Annals of Human Genetics, vol.65, issue.5, pp.439-458, 2001.
DOI : 10.1046/j.1469-1809.2001.6550439.x

A. Piazza, E. Van-loghem, G. De-lange, E. S. Curtoni, L. Ulizzi et al., Immunoglobulin allotypes in Sardinia, Am J Hum Genet, vol.28, pp.77-86, 1976.

R. Piercy, K. M. Sullivan, N. Benson, and P. Gill, The application of mitochondrial DNA typing to the study of white Caucasian genetic identification, International Journal of Legal Medicine, vol.21, issue.2, pp.85-90, 1993.
DOI : 10.1007/BF01225046

S. Plaza, F. Calafell, A. Helal, N. Bouzerna, G. Lefranc et al., Joining the Pillars of Hercules: mtDNA Sequences Show Multidirectional Gene Flow in the Western Mediterranean, Annals of Human Genetics, vol.61, issue.4, pp.312-340, 2003.
DOI : 10.1101/gr.217602

E. S. Poloni, Y. Naciri, R. Bucho, R. Niba, B. Kervaire et al., Genetic Evidence for Complexity in Ethnic Differentiation and History in East Africa, Annals of Human Genetics, vol.28, issue.Suppl, pp.582-600, 2009.
DOI : 10.1111/j.1469-1809.2009.00541.x

L. Quintana-murci, A. Bigham, H. Rouba, A. Barakat, K. Mcelreavey et al., Y-chromosomal STR haplotypes in Berber and Arabic-speaking populations from Morocco, Forensic Science International, vol.140, issue.1, pp.113-118, 2004.
DOI : 10.1016/j.forsciint.2003.11.006

L. Quintana-murci, H. Quach, C. Harmant, F. Luca, B. Massonnet et al., Maternal traces of deep common ancestry and asymmetric gene flow between Pygmy hunter-gatherers and Bantu-speaking farmers, Proceedings of the National Academy of Sciences, vol.105, issue.5, pp.1596-601, 2008.
DOI : 10.1073/pnas.0711467105
URL : https://hal.archives-ouvertes.fr/hal-00271643

J. C. Rando, F. Pinto, A. M. Gonzalez, M. Hernandez, J. M. Larruga et al., Mitochondrial DNA analysis of Northwest African populations reveals genetic exchanges with European, Near-Eastern, and sub-Saharan populations, Annals of Human Genetics, vol.62, issue.6, pp.531-50, 1998.
DOI : 10.1046/j.1469-1809.1998.6260531.x

H. Razafindrazaka, Le peuplement humain de Madagascar : Anthropologie génétique de trois groupes traditionnels, Thèse en Biologie, Santé, Biotechnologies (BSB). soutenue à l'Université Toulouse III -Paul Sabatier, p.399, 2010.

H. Razafindrazaka, F. X. Ricaut, M. P. Cox, M. Mormina, J. M. Dugoujon et al., Complete mitochondrial DNA sequences provide new insights into the Polynesian motif and the peopling of Madagascar, European Journal of Human Genetics, vol.79, issue.3, pp.575-581, 2009.
DOI : 10.1086/379272

J. Razafinrakoto, La Valiha de Madagascar ? Tradition et modernité en Imérina de 1820 à 1995 (étude organologique, acoustique et socio-historique), UFR de Musicologie, p.463, 1997.

M. Regueiro, A. M. Cadenas, T. Gayden, P. A. Underhill, and R. J. Herrera, Iran: Tricontinental Nexus for Y-Chromosome Driven Migration, Human Heredity, vol.61, issue.3, pp.132-143, 2006.
DOI : 10.1159/000093774

F. X. Ricaut, T. Thomas, C. Arganini, J. Staughton, M. Leavesley et al., Mitochondrial DNA Variation in Karkar Islanders, Annals of Human Genetics, vol.62, issue.6, pp.349-67, 2008.
DOI : 10.1093/molbev/msh238

F. X. Ricaut, H. Razafindrazaka, M. P. Cox, J. M. Dugoujon, E. Guitard et al., A new deep branch of eurasian mtDNA macrohaplogroup M reveals additional complexity regarding the settlement of Madagascar, BMC Genomics, vol.10, issue.1, p.605, 2009.
DOI : 10.1186/1471-2164-10-605

C. Robino, F. Crobu, D. Gaetano, C. Bekada, A. Benhamamouch et al., Analysis of Y-chromosomal SNP haplogroups and STR haplotypes in an Algerian population sample, International Journal of Legal Medicine, vol.69, issue.3, pp.251-255, 2008.
DOI : 10.1007/s00414-007-0203-5

A. Rosa, A. Brehm, T. Kivisild, E. Metspalu, and R. Villems, MtDNA Profile of West Africa Guineans: Towards a Better Understanding of the Senegambia Region, Annals of Human Genetics, vol.61, issue.4, pp.340-52, 2004.
DOI : 10.1086/324511

A. Rosa, C. Ornelas, A. Brehm, and R. Villems, Population data on 11 Y-chromosome STRs from Guin??-Bissau, Forensic Science International, vol.157, issue.2-3, pp.210-217, 2006.
DOI : 10.1016/j.forsciint.2005.04.005

D. J. Rowold, J. R. Luis, M. C. Terreros, and R. J. Herrera, Mitochondrial DNA geneflow indicates preferred usage of the Levant Corridor over the Horn of Africa passageway, Journal of Human Genetics, vol.88, issue.5, pp.436-483, 2007.
DOI : 10.1007/s10038-007-0132-7

S. Roychoudhury, S. Roy, A. Basu, R. Banerjee, H. Vishwanathan et al., Genomic structures and population histories of linguistically distinct tribal groups of India, Human Genetics, vol.109, issue.3, pp.339-50, 2001.
DOI : 10.1007/s004390100577

S. Sahoo and V. K. Kashyap, Phylogeography of mitochondrial DNA and Y-Chromosome haplogroups reveal asymmetric gene flow in populations of Eastern India, American Journal of Physical Anthropology, vol.12, issue.1, pp.84-97, 2006.
DOI : 10.1002/ajpa.20399

A. Salas, D. Comas, M. V. Lareu, J. Bertranpetit, and A. Carracedo, mtDNA analysis of the Galician population: a genetic edge of European variation, European Journal of Human Genetics, vol.6, issue.4, pp.365-75, 1998.
DOI : 10.1038/sj.ejhg.5200202

A. Salas, M. Richards, T. De-la-fe, M. V. Lareu, B. Sobrino et al., The Making of the African mtDNA Landscape, The American Journal of Human Genetics, vol.71, issue.5, pp.1082-111, 2002.
DOI : 10.1086/344348

A. Salas, M. Richards, M. V. Lareu, R. Scozzari, A. Coppa et al., The African Diaspora: Mitochondrial DNA and the Atlantic Slave Trade, The American Journal of Human Genetics, vol.74, issue.3, pp.454-65, 2004.
DOI : 10.1086/382194

M. L. Sampietro, D. Caramelli, O. Lao, F. Calafell, D. Comas et al., The Genetics of the Pre-Roman Iberian Peninsula: A mtDNA Study of Ancient Iberians, Annals of Human Genetics, vol.67, issue.5, pp.535-583, 2005.
DOI : 10.1007/BF00182747

J. J. Sanchez, C. Hallenberg, C. Borsting, A. Hernandez, and N. Morling, High frequencies of Y chromosome lineages characterized by E3b1, DYS19-11, DYS392-12 in Somali males, European Journal of Human Genetics, vol.92, issue.7, pp.856-66, 2005.
DOI : 10.1086/346065

A. Sanchez-mazas and B. Pellegrini, Polymorphismes rh??sus, GM et HLA et histoire de l'homme moderne, Bulletins et M??moires de la Soci??t?? d'anthropologie de Paris, vol.2, issue.1, pp.57-76, 1990.
DOI : 10.2307/1531429

A. Sanchez-mazas, M. Fernandez-vina, D. Middleton, J. A. Hollenbach, S. Buhler et al., Immunogenetics as a tool in anthropological studies, Immunology, vol.25, issue.Suppl 1, pp.143-164, 2011.
DOI : 10.1111/j.1365-2567.2011.03438.x

M. S. Schanfield and R. L. Kirk, Further studies on the immunoglobulin allotypes (Gm, Am and Km) in India, Acta Anthropogenet, vol.5, pp.1-21, 1981.

M. S. Schanfield, R. E. Ferrell, A. A. Hossaini, G. Sandler, S. Stevenson et al., Immunoglobulin allotypes in Southwest Asia: Populations at the Crossroads, American Journal of Human Biology, vol.72, issue.6, pp.671-682, 2008.
DOI : 10.1002/ajhb.20792

O. Semino, A. S. Santachiara-benerecetti, F. Falaschi, L. L. Cavalli-sforza, and P. A. Underhill, Ethiopians and Khoisan Share the Deepest Clades of the Human Y-Chromosome Phylogeny, The American Journal of Human Genetics, vol.70, issue.1, pp.265-268, 2002.
DOI : 10.1086/338306

S. Sengupta, L. A. Zhivotovsky, R. King, S. Q. Mehdi, C. A. Edmonds et al., Polarity and Temporality of High-Resolution Y-Chromosome Distributions in India Identify Both Indigenous and Exogenous Expansions and Reveal Minor Genetic Influence of Central Asian Pastoralists, The American Journal of Human Genetics, vol.78, issue.2, pp.202-221, 2006.
DOI : 10.1086/499411

F. Shakib and D. Barr, THE INCIDENCE OF Gm ALLOTYPES IN A GROUP OF IRAQI ARABS, European Journal of Immunogenetics, vol.22, issue.5, pp.369-373, 1980.
DOI : 10.1084/jem.125.1.177

S. Sharma, A. Saha, E. Rai, A. Bhat, and R. Bamezai, Human mtDNA hypervariable regions, HVR I and II, hint at deep common maternal founder and subsequent maternal gene flow in Indian population groups, Journal of Human Genetics, vol.47, issue.10, pp.497-506, 2005.
DOI : 10.1007/s10038-005-0284-2

L. I. Shlush, D. M. Behar, G. Yudkovsky, A. Templeton, Y. Hadid et al., The Druze: A Population Genetic Refugium of the Near East, PLoS ONE, vol.70, issue.3, 2008.
DOI : 10.1371/journal.pone.0002105.s008

T. S. Simonson, J. Xing, R. Barrett, E. Jerah, P. Loa et al., Ancestry of the Iban Is Predominantly Southeast Asian: Genetic Evidence from Autosomal, Mitochondrial, and Y Chromosomes, PLoS ONE, vol.72, issue.2, 2011.
DOI : 10.1371/journal.pone.0016338.s009

P. Soares, J. A. Trejaut, J. H. Loo, C. Hill, M. Mormina et al., Climate Change and Postglacial Human Dispersals in Southeast Asia, Molecular Biology and Evolution, vol.25, issue.6, pp.1209-1227, 2008.
DOI : 10.1093/molbev/msn068

F. X. Soloarivony, Répartition des groups sanguins dans certains groupes de populations Malgache, Thèse en sciences, p.253, 1985.

H. Soodyall, T. Jenkins, and M. Stoneking, ???Polynesian??? mtDNA in the Malagasy, Nature Genetics, vol.20, issue.4, pp.377-378, 1995.
DOI : 10.1038/369025a0

L. Souto, L. Gusmao, E. Ferreira, A. Amorim, F. Corte-real et al., Y-chromosome STR haplotypes in East Timor: Forensic evaluation and population data, Forensic Science International, vol.156, issue.2-3, pp.261-266, 2006.
DOI : 10.1016/j.forsciint.2005.02.015

A. G. Steinberg and C. E. Cook, The distribution of the human immunoglobulin allotypes, 1981.

A. G. Steinberg and L. I. Eng, Immunoglobulin G Allotypes in Malayan Aborigines, Human Heredity, vol.22, issue.3, pp.254-258, 1972.
DOI : 10.1159/000152495

A. G. Steinberg and N. E. Morton, Immunoglobulins in the Eastern Carolines, American Journal of Physical Anthropology, vol.38, issue.3, pp.699-702, 1973.
DOI : 10.1002/ajpa.1330380307

A. G. Steinberg, Gm and Inv allotypes of some Sidamo Ethiopians, American Journal of Physical Anthropology, vol.3, issue.3, pp.403-408, 1973.
DOI : 10.1002/ajpa.1330390308

A. G. Steinberg, Gm and Inv studies on eight Iranian populations with distance measures among the six from the Caspian Littoral, American Journal of Physical Anthropology, vol.33, issue.3, pp.375-382, 1980.
DOI : 10.1002/ajpa.1330530309

B. Sykes, A. Leiboff, J. Low-beer, S. Tetzner, and M. Richards, The origins of the Polynesians: an interpretation from mitochondrial lineage analysis, Am J Hum Genet, vol.57, pp.1463-75, 1995.

A. Tajima, M. Hayami, K. Tokunaga, T. Juji, M. Matsuo et al., Genetic origins of the Ainu inferred from combined DNA analyses of maternal and paternal lineages, Journal of Human Genetics, vol.49, issue.4, pp.187-93, 2004.
DOI : 10.1007/s10038-004-0131-x

F. Tajima, Statistical method for testing the neutral mutation hypothesis by DNA polymorphism, Genetics, vol.123, pp.585-95, 1989.

K. Thangaraj, B. P. Naidu, F. Crivellaro, R. Tamang, S. Upadhyay et al., The Influence of Natural Barriers in Shaping the Genetic Structure of Maharashtra Populations, PLoS ONE, vol.30, issue.2, 2010.
DOI : 10.1371/journal.pone.0015283.s004

K. Thangaraj, L. Singh, A. G. Reddy, V. R. Rao, S. C. Sehgal et al., Genetic Affinities of the Andaman Islanders, a Vanishing Human Population, Current Biology, vol.13, issue.2, pp.86-93, 2003.
DOI : 10.1016/S0960-9822(02)01336-2

I. Thanseem, K. Thangaraj, G. Chaubey, V. K. Singh, L. V. Bhaskar et al., Genetic affinities among the lower castes and tribal groups of India: inference from Y chromosome and mitochondrial DNA, BMC Genetics, vol.7, issue.1, p.42, 2006.
DOI : 10.1186/1471-2156-7-42

S. A. Tishkoff, F. A. Reed, F. R. Friedlaender, C. Ehret, A. Ranciaro et al., The Genetic Structure and History of Africans and African Americans, Science, vol.324, issue.5930, pp.1035-1079, 2009.
DOI : 10.1126/science.1172257

S. Tofanelli, S. Bertoncini, L. Castri, D. Luiselli, F. Calafell et al., On the Origins and Admixture of Malagasy: New Evidence from High-Resolution Analyses of Paternal and Maternal Lineages, Molecular Biology and Evolution, vol.26, issue.9, pp.2109-2124, 2009.
DOI : 10.1093/molbev/msp120

M. J. Trovoada, L. Pereira, L. Gusmao, A. Abade, A. Amorim et al., Pattern of mtDNA Variation in Three Populations from Sao Tome e Principe, Annals of Human Genetics, vol.61, issue.1, pp.40-54, 2004.
DOI : 10.1046/j.1469-1809.2001.6530271.x

J. Tsaboto, Pouvoir traditionnel chez les Antemoro de la Matataña de 1937 à nos jours : l'exemple des Antemañasara, pp.309-329, 1994.

C. Turchi, L. Buscemi, E. Giacchino, V. Onofri, L. Fendt et al., Polymorphisms of mtDNA control region in Tunisian and Moroccan populations: An enrichment of forensic mtDNA databases with Northern Africa data, Forensic Science International: Genetics, vol.3, issue.3, pp.166-72, 2009.
DOI : 10.1016/j.fsigen.2009.01.014

P. Underhill, N. Myres, S. Rootsi, M. Metspalu, L. Zhivotovsky et al., Separating the post-Glacial coancestry of European and Asian Y chromosomes within haplogroup R1a, Eur J Hum Genet, vol.8, pp.479-84, 2010.

E. Van-loghem, G. De-lange, H. Matsumoto, T. Miyazaki, and K. Ohkura, IMMUNOGLOBULIN HAPLOTYPES OF TWO POPULATION GROUPS IN IRAN, European Journal of Immunogenetics, vol.22, issue.6, pp.385-390, 1977.
DOI : 10.1007/BF00338339

M. Van-oven, J. M. Hammerle, M. Van-schoor, G. Kushnick, P. Pennekamp et al., Unexpected Island Effects at an Extreme: Reduced Y Chromosome and Mitochondrial DNA Diversity in Nias, Molecular Biology and Evolution, vol.28, issue.4, pp.1349-61, 2010.
DOI : 10.1093/molbev/msq300

L. Varesi, M. Memmi, M. C. Cristofari, G. E. Mameli, C. M. Calo et al., Mitochondrial control-region sequence variation in the Corsican population, France, American Journal of Human Biology, vol.88, issue.3, pp.339-351, 2000.
DOI : 10.1002/(SICI)1520-6300(200005/06)12:3<339::AID-AJHB4>3.0.CO;2-U

C. Vernesi, D. Benedetto, G. Caramelli, D. Secchieri, E. Simoni et al., Genetic characterization of the body attributed to the evangelist Luke, Proceedings of the National Academy of Sciences, vol.98, issue.23, pp.13460-13463, 2001.
DOI : 10.1073/pnas.211540498

W. Wetterstrom and H. T. Wright, Une contribution à la paléoethnobotanique du plateau central de Madagascar, Taloha, vol.11, pp.147-166, 1992.

E. T. Wood, D. A. Stover, C. Ehret, G. Destro-bisol, G. Spedini et al., Contrasting patterns of Y chromosome and mtDNA variation in Africa: evidence for sex-biased demographic processes, European Journal of Human Genetics, vol.85, issue.7, pp.867-876, 2005.
DOI : 10.1038/ng1428

E. Vernier and J. Millot, Archéologie Malgache comptoirs musulmans. Catalogues du musée de l'homme. Série F Madagascar I. Muséum national d'histoire naturelles, p.177, 1971.

H. Walter, A. Arndt-hanser, M. A. Raffa, and B. Gumbel, On the distribution of some genetic markers in libya, Humangenetik, vol.27, pp.129-136, 1975.

H. Walter, H. Matsumoto, H. Danker-hopfe, K. C. Malhotra, and B. N. Mukherjee, GM and KM allotypes in eight tribal populations of madyha Pradesh and Orissa, India, The Japanese Journal of Human Genetics, vol.7, issue.1, pp.193-203, 1997.
DOI : 10.1007/BF02766922

J. Wang, Maximum-likelihood estimation of admixture proportions from genetic data, Genetics, vol.164, pp.747-765, 2003.

S. Wright, Genetical Structure of Populations, Nature, vol.166, issue.4215, pp.247-249, 1950.
DOI : 10.1038/166247a0

B. Yadav, A. Raina, and T. D. Dogra, Genetic polymorphisms for 17 Y-chromosomal STR haplotypes in Jammu and Kashmir Saraswat Brahmin population, Legal Medicine, vol.12, issue.5, pp.249-55, 2010.
DOI : 10.1016/j.legalmed.2010.05.003

M. G. Yogore and M. S. Schanfield, IMMUNOGLOBULIN ALLOTYPES IN FILIPINOS: I. LACK OF ASSOCIATION BETWEEN SCHISTOSOMA JAPONICA INFECTION AND IMMUNOGLOBULIN ALLOTYPES, European Journal of Immunogenetics, vol.40, issue.5, pp.419-423, 1981.
DOI : 10.1002/eji.1830060815

R. Y. Yong, L. K. Lee, and E. P. Yap, Y-chromosome STR haplotype diversity in three ethnic populations in Singapore, Forensic Science International, vol.159, issue.2-3, pp.244-57, 2006.
DOI : 10.1016/j.forsciint.2005.05.010

P. A. Zalloua, D. E. Platt, M. Sibai, J. Khalife, N. Makhoul et al., Identifying Genetic Traces of Historical Expansions: Phoenician Footprints in the Mediterranean, The American Journal of Human Genetics, vol.83, issue.5, pp.633-642, 2008.
DOI : 10.1016/j.ajhg.2008.10.012

P. A. Zalloua, Y. Xue, J. Khalife, N. Makhoul, L. Debiane et al., Y-Chromosomal Diversity in Lebanon Is Structured by Recent Historical Events, The American Journal of Human Genetics, vol.82, issue.4, pp.873-882, 2008.
DOI : 10.1016/j.ajhg.2008.01.020

H. Zhong, H. Shi, X. B. Qi, Z. Y. Duan, P. P. Tan et al., Extended Y Chromosome Investigation Suggests Postglacial Migrations of Modern Humans into East Asia via the Northern Route, Molecular Biology and Evolution, vol.28, issue.1, pp.717-727, 2011.
DOI : 10.1093/molbev/msq247

K. A. Adelaar, Malay Influence on Malagasy: Linguistic and Culture-Historical Implications, Oceanic Linguistics, vol.28, issue.1, pp.1-46, 1989.
DOI : 10.2307/3622973

K. A. Adelaar, Asian roots of the Malagasy: a linguistic perspective. Leiden: Bijdragen tot de Taal-, Land-en Volkenkunde, pp.325-56, 1995.

K. A. Adelaar, Loanwords in Malagasy In Loanwords in the World's Languages. A Comparative Handbook, pp.717-746, 2009.

P. Alexandre, Les Africains, Initiation à une longue histoire et à de vieilles civilisations de l'aube de l'humanité au début de la colonisation, p.607, 1981.

C. Allibert, Les mouvements austronésiens vers l'océan Indien occidental ? La tradition arabico-malgache revisitée, pp.61-76, 1995.

G. Althabe, Schéma pour une anthropologie de la Vallée Antemoro de la Mananano, Ny razana tsy mba maty, édité par Domenichini J.P., Poirier J. et Raherisoanjato D. Antananarivo: Librairie de Madagascar, pp.143-204, 1984.

R. Battistini and P. Vérin, Irodo et la tradition Vohémarienne, Arabes et Islamisés à Madagascar et dans l'Océan Indien. Taloha numéro 2, XXII-XLVI, 1967.

P. Beaujard, Les manuscrits arabico-malgaches (sorabe) du pays Antemoro, OMASALY SY ANIO N°28, pp.123-149, 1988.
URL : https://hal.archives-ouvertes.fr/halshs-00778333

P. Beaujard, Islamisés et systèmes royaux dans le Sud-Est de Madagascar : les exemples antemoro et tañala, Hier et aujourd'hui (Pouvoirs et États dans l'histoire de Madagascar et du Sud-Ouest de l'océan Indien), pp.235-286, 1991.

P. Beaujard, Les arrivées austronésiennes à Madagascar : vagues ou continuum ? In Études Océan Indien (Langues et cultures de l'océan Indien occidental), pp.59-147, 2003.

P. Beaujard, Madagascar et l'Afrique entre identité insulaire et appartenance historique, p.485, 2007.

P. Beaujard and J. Tsaboto, Les parias antemoro : les Antevolo. Actes du Colloque international sur l'esclavage. Antanarivo. 23-28 septembre 1996, pp.383-399, 1996.

J. Bencheikh and M. A. , D'Arabie et d'Islam, Oddile Jacob, p.236, 1992.

G. Campbell, The State and Pre-Colonial Demographic History: The Case of Nineteenth-Century Madagascar, The Journal of African History, vol.32, issue.03, pp.415-460, 1991.
DOI : 10.1017/S0021853700031534

M. Chabeuf, Les caractères physiques de sept populations malgaches. Bulletins et Mémoires de la Société d'anthropologie de Paris, pp.181-208, 1969.

B. Champion, La Case, les Sorabe, l'Histoire. Communication au colloque Le Voyage à Madagascar, de la découverte à l'aventure intellectuelle, 2003.
URL : https://hal.archives-ouvertes.fr/hal-01170797

B. Champion, La troisième pierre du foyer : des clans et des clones dans la vallée de la Manañano Communication au séminaire international Écrire dans l'Océan indien : silence, censures, oublis, 2004.

M. Chamla, Recherche anthropologiques sur l'origine des Malgaches, Mémoires du Museum, p.205, 1958.

N. Chittick, L'archéologie de la côte africaine, Arabes et Islamisés à Madagascar et dans l'Océan Indien. Taloha numéro 2, pp.21-38, 1967.

C. O. Dahl, Malgache et maanyan. Une comparaison linguistique, Avhandlinger utgitt av Instituttet, vol.3, 1951.

C. O. Dalh, Loanwords from Malay in Malagasy In Migration from Kalimantan to Madagascar. Norwegian University press. The institute for comparative research in human culture, pp.14-48, 1991.

H. Deschamps and S. Vianes, Les peuples malgaches : les malgaches du Sud-Est. Presses universitaires de France, p.118, 1959.

H. Deschamps, Histoire de Madagascar, p.348, 1972.

. R. Dewar and H. T. Wright, The culture history of Madagascar, Journal of World Prehistory, vol.12, issue.4, pp.417-466, 1993.
DOI : 10.1007/BF00997802

J. Dez, De l'influence arabe à Madagascar à l'aide de faits linguistiques. Documents présentés par le service Général de l'Information de la République Malagasy, pp.1-20, 1967.

J. Domenichini and D. B. Ramiaramanana, Histoire de Madagascar, 2002.

M. Dorigny and B. Gainot, Atlas des esclavages. Traites, sociétés coloniales, abolitions de l'Antiquité à nos jours, p.79, 2006.
URL : https://hal.archives-ouvertes.fr/hal-00285932

G. Ferrand, Les musulmans à Madagascar et aux îles Comores, 1891.

L. L. Field and J. M. Dugoujon, Immunoglobulin allotyping (Gm, Km) of GAW5 families, Genetic Epidemiology, vol.19, issue.1, pp.31-33, 1989.
DOI : 10.1002/gepi.1370060108

L. L. Field, S. Surje, and A. K. Ray, Immunoglobulin (GM and KM) allotypes in the Sikh population of India, American Journal of Physical Anthropology, vol.19, issue.1, pp.31-35, 1988.
DOI : 10.1002/ajpa.1330750105

E. Flacourt and . De, Histoire de la Grande Isle Madagascar, éditée, annotée et présentée par Claude Allibert, p.712, 1661.

A. Grandidier, Souvenirs et voyages d'Alfred Grandidier : 1865-1870 : d'après son manuscrit inédit de 1916 / Alfred Grandidier ; présentation Pierre V. collab. et ill. Christian G. Mantaux. Tananarive : Association malgache d'archéologie, p.50, 1971.

W. D. Griffin, The Matitanana Archaeological Project: Culture History and Social Complexity in the Seven Rivers Region of Southeastern Madagascar. Doctor of Philosophy (Anthropology) University of Michigan, p.588, 2009.

R. K. Kent, Madagascar and Africa III. The Anteimoro: A Theocracy in Southeastern Madagascar, The Journal of African History, vol.101, pp.45-65, 1969.

J. Lombard, Le royaume sakalava du Menabé : essai d'analyse d'un système politique à Madagascar 17è-20è Bondy : Ed. de l'ORSTOM, p.151, 1988.

M. L. Marikandia, The Vezo of the Fiherena Coast, Southwest Madagascar: Yesterday and Today, Ethnohistory, vol.48, issue.1-2, pp.157-70, 2001.
DOI : 10.1215/00141801-48-1-2-157

L. Munthe, La tradition Arabico-Malgache vue à travers le manuscrit A6 d'Oslo et d'autres manuscrits disponibles, p.327, 1982.

P. Ottino, Le Moyen Age de l'Océan Indien et le peuplement de Madagascar. CERSOI. Annuaire des Pays de l'Océan Indien, pp.197-221, 1976.

P. Ottino, Les Andriambahoaka malgache et l'héritage indonésien, Les Souverains de Madagascar par Raison Jourde.F. Karthala. Paris, pp.71-96, 1983.

P. Ottino, Madagascar, les Comores et le Sud-ouest de l'Océan Indien, p.102, 1974.

C. Ottoni, C. Martinez-labarga, E. L. Loogvali, E. Pennarun, A. Achilli et al., First Genetic Insight into Libyan Tuaregs: A Maternal Perspective, Annals of Human Genetics, vol.3, issue.4, pp.438-486, 2009.
DOI : 10.1111/j.1469-1809.2009.00526.x

J. Pannetier, Archéologie des pays Antambahoaka et Antaimoro, Civilisation de l'Est et du Sud-Est. Taloha numéro 6, pp.53-71, 1974.

J. Poirier and S. Rajaona, Civilisation malgache I. Série Sciences Humaines N°1. Faculté des lettres et des sciences humaines, p.403, 1964.

S. Pradines, L. Guennec-coppens, F. Mery, and S. , L'art de la guerre chez les Swahili : les premiers forts d'Afrique orientaleIn: Journal des africanistes, pp.71-87, 2002.

R. Rakotolahy and C. , Le réfèrent de l'esclavage dans les représentations transactionnelles marchandes à Madagascar, Journal des africanistes, vol.701, issue.2, pp.123-144, 2000.

F. Raison-jourde, Introduction, Les Souverains de Madagascar par Raison Jourde.F. Karthala. Paris, pp.7-68, 1983.

N. Rajaonarimanana, Savoirs arabico-malgaches, la tradition manuscrite des devins Antemoro Anakara, Institut National des Langues et des Civilisations Orientales, p.286, 1990.

E. Ralaimihoatra, . Tananarive, and C. L. Randriamananoro-rabesahala, Histoire de Madagascar -Des origines à la fin du XIXe siècle Ambohimanga-Rova-Approche anthropologique de la civilisation mérina (Madagascar) Texte remanié de Thèse de doctorat : Civilisation, anthropologie culturelle, p.393, 1965.

D. Reydellet, Le Royaume Hova et l'Histoire Malgache, La Varangue. La Réunion, p.93, 2000.

C. Robineau, L'Islam aux Comores Une étude d'histoire culturelle de l'île d'Anjouan, Arabes et Islamisés à Madagascar et dans l'Océan indien. Taloha numéro, pp.65-93, 1967.

A. Rochon, Voyage à Madagascar et aux Indes orientales, p.322, 1791.

D. Rolland, Glissement de terrain ? Une ethnologue dans la vallée de la Matitanana, p.224, 2007.

D. Rolland, Introduction à une anthropologie de la Basse-Matitanana, Civilisation de l'Est et du Sud-Est. Taloha numéro 6, pp.39-52, 1973.

D. Rolland, Matatanes de Flacourt et Antemoro des SorabesActes du colloques d'Orléans) Numéro 23/24, pp.149-156, 1997.

P. Simon, La langue des ancêtres. Ny Fitenin-drazana, p.506, 2006.

P. Verin, Retrospective et Problemes de l'Archeologie. Asian Perspectives, pp.198-218, 1962.

P. Verin, Les Arabes dans l'Océan Indien et à Madagascar, 1967.